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agbiotec

agbiotec

100% GRADE-A geek: GNU/Linux, web 2.0, Ruby, semantic web, singularity, free software = free society, help the environment and animals
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RT @developerworks Push RSS to new limits - Use #RSS to construct a neural-network mesh of related data http://www.ibm.com/develop...
I do not consider myself an expert on anything and try to maintain a beginner's mind.
how you can tap cloud resources, through your IDE, Sun Studio http://wikis.sun.com/display... (see also my blog post http://semanticlifescience.wordpress.com/2009...)
anyone can point me to an AMI id that has Sun Grid Engine 6.2 installed? #aws #ec2 #cloud
MapReduce-based parsing of GFF files using Hadoop pipes and python http://bcbio.wordpress.com/2009...
sun grid engine on Amazon EC2, via the @bioteam http://blog.bioteam.net/wp-cont...
install a 0-node SGE system on your laptop or desktop and allocate nodes on the Cloud (EC2) on demand (slide 27) http://www.cs.mu.oz.au/678...
even AT&T on the cloud jumpwagon https://www.synaptic.att.com/staas
happy to see that JCVI's logo is included on the Cloud Market site http://thecloudmarket.com/
solutions for managing the EC2 cloud besides the Console: www.elastra.com www.elastdream.com ...Me, I dream of drag,click, connect clusters!
RT @cloudstories Abstract | Searching for SNPs with cloud computing [ genomebiology.com ] [shared by 9 people] (.. http://www.socialreader.net/comment...
ok seems like SAIC has a cloud http://saiccloud.com/ - What now ? (weird webpage with two boxes only! for usr/pass)
new SemanticLifeScie one more reason to use email on the cloud (aka Gmail): OK this is a quick one… I’ve just s... http://semanticlifescience.wordpress.com/2009...
setup s3fs and about to send 42GB to S3... then wipe the hard drive and here comes Ubuntu 9 on the desktop machine !
Cycle Computing's Tour de Cloud: Bio-IT World | Despite the enormous appeal of cloud computing, making practical u... http://www.bio-itworld.com/2009...
is enjoying a lean juicy steak... so long vegeterianism
NeXt GENeration Genomic Technologies for Now Generation Discoveries http://www.healthtech.com/xgn
via @bioteam "Amazon’s EC2 and S3 are “The Grid” as promised in the 90’s... all others are academic or vaporware" http://blog.bioteam.net/wp-cont...
create workflows backed by Hadoop, but with no Map/Reduce programming, just plug pipes together http://www.cascading.org/about...
too much science, too little computing at Masterworks / Biocomputing in PB253-254 at #sc09 At least the wireless is working
This goes double for “private clouds”... Semantic quibble: “Cloud” != “grid” != “cluster” http://blog.bioteam.net/wp-cont...
Open Source Cloud Computing Software at SC 09 http://blog.rgrossman.com/2009... #sc09
CERN virtual machine, appliance http://cernvm.cern.ch/cernvm/
watching @mndoci throwing Ruby on Rails code on his slides expressing sentences in the English language (has_many :meanings)
At Cloud computing for systems biology workshop #sc09
heard (bioIT PI) speaker mention drawback of S3 the 5GB file size. Lack of knowledge for AWS platform,use EBS (unlimit), archive on S3 #sc09
@foertter ag=agricultural+biotec=biotech. Name of the dept. in Univ. of Athens, Greece where did college 10yrs ago. Stuck with it ever since
less than 48h and counting... soon I'll be basking in the (compute) clouds at Supercomputing '09... Portland here I come! #sc09
new SemanticLifeScie compute with infinite capacity from within your IDE: Imagine to be able to write code to proces... http://semanticlifescience.wordpress.com/2009...
thinking now how my app for summarizing Affymetrix probe values across thousands of arrays would have excelled with Map/Reduce... did RDBMS
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