Allyson Lister

There is no excerpt because this is a protected post. - Allyson Lister

There is no excerpt because this is a protected post. - Allyson Lister

In the summer of 2012, I worked with Robert Stevens and Duncan Hull (among others) on additions to the Software Ontology. As it was a short-term appointment, I kept detailed notes on the Software Ontology blog. A summary of those notes is available as its own post. I had loads of fun doing the work, [...] - Allyson Lister

Below you can find a complete table of contents for all thesis-related posts (you can also get to the posts via the “thesis” tag I have used for each). Enjoy! Thesis Posts Abstract Additional Front Material Chapter 1: Background 1.1: Overview 1.2: What does systems biology data look like? 1.3: Modelling biological systems 1.4: Standards [...] - Allyson Lister

[...] And, if you’re interested in how I performed the conversion, I’ve written about that too. [...] - Allyson Lister

[...] Chapter 6: General discussion [...] - Allyson Lister

[...] Chapter 5: Rule-based mediation for the semantic integration of systems biology data [...] - Allyson Lister

[...] Chapter 4: Model Format OWL integrates multiple SBML specification documents [...] - Allyson Lister

[...] Chapter 3: Saint: a Web application for model annotation utilising syntactic integration [...] - Allyson Lister

[...] Chapter 2: SyMBA: a Web-based metadata and data archive for biological experiments [...] - Allyson Lister

[...] 1.6: Data integration methodologies for systems biology [...] - Allyson Lister

[...] 1.5: What are ontologies? [...] - Allyson Lister

[...] 1.4: Standards as a shared structure for data [...] - Allyson Lister

[...] 1.3: Modelling biological systems [...] - Allyson Lister