two pathogenic species of Neisseria infect only humans: N. meningitidis and N. gonorrhoeae
- Ruchira S. Datta
N. meningitidis has 5-10% mortality rate. There exists an incompletely effective vaccine which the people where this is endemic cannot afford.
- Ruchira S. Datta
Gonorrhoea has become resistant to almost all antibiotics now, so the CDC calls it a superbug. #LAMG10
- Ruchira S. Datta
asymptomatic carriage of N. meningitidis: 20-50%
- Ruchira S. Datta
DNA Uptake sequence (DUS) GCCGCCTGAA: Neisseria won't uptake DNA unless this sequence is present
- Ruchira S. Datta
these are present in many Neisseria species. variant DUS GTCGTCTGAA used by a couple of species (N sicca and N mucosa), which also is effective for uptake.
- Ruchira S. Datta
looked for evidence of horizontal gene transfer using Recombination Detection Program (RDPv3.8). detected recombination breakpoints in 53 of 69 vir genes, with >50% of these involving both commensal and pathogenic species
- Ruchira S. Datta
phylogenetic method: make gene trees of the virulence genes, check whether they are topologically different from other gene trees and p-value significance. most disagree.
- Ruchira S. Datta
virulence is a dynamic state: there may not be a genetic border separating pathogens and commensals
- Ruchira S. Datta
Wu et al New Engl J Med vol 360 2009: Emergence of Ciprofloxacin resistant N meningiditis in N. America. This resistance gene came from a commensal Neisseria species present in throats of contacts.
- Ruchira S. Datta
Type IV pili exhibit variation in the antigens they present. Silent copies of pilin genes combine with pilE (pil expression)
- Ruchira S. Datta
Pilin antigenic variation occurs in vitro and in vivo, and is thought to be a strategy to evade immune recognition.
- Ruchira S. Datta
cell pumps out DNA, autolysis releases the DNA, and the living cell takes up DNA via the Type IV pilus (Tfp)
- Ruchira S. Datta
think the silent variant genes have a function, but don't know what
- Ruchira S. Datta
commensals undergo limited pilin antigenic variation. how do they avoid our protective antibodies?
- Ruchira S. Datta
retraction of the pili extends mechanical force into the cell, triggering many signaling events
- Ruchira S. Datta
can trigger apoptotic cell death, which is pro-inflammatory
- Ruchira S. Datta
but Tfp triggers anti-apoptotic pathways, activating ERK and preventing release of Cytochrome C and apoptosis
- Ruchira S. Datta
Higashi et al showed this involvement in 2007
- Ruchira S. Datta
working hypothesis: Tfp was evolved by commensals to help them colonize silently, and this "cytoprotective" activity helps N. meningitidis and N. gonorrhoea infect asymptomatically
- Ruchira S. Datta
differentiate commensal and pathogenic Tfp to look for pathogenic traits? e.g., host signaling
- Ruchira S. Datta
Q: how to define commensal vs pathogenic, since many of the "pathogens" are carried asymptomatically? A: do have good tests for species identity. whether it's the cause of, e.g., septicemia, can only infer from lack of other bacteria
- Ruchira S. Datta
Jonathan Eisen: any distance cutoff for uptake of the vir genes btw different species? A: haven't looked at that
- Ruchira S. Datta