Esophageal brushing samples -> Illumina -> bioinfo. More than fifteen viral families detected in the esophagus. Five detected in 2 more more samples. Cyco-like viruses identified in 13/50 samples-- non enveloped sequence. All metagenomce sequences branch out separate from NCBI sequences (mostly from stools).
- Erick Matsen
Torque teno virus identified in 15/50 samples. First found in patients with Hep. Well mixed with DB sequences.
- Erick Matsen
HPV- identified in 3/50 samples. Human adenovirus in 23/50 samples, and HHV 4 in 15/50 samples.
- Erick Matsen
HPV is only found in cancer patients, but everything else does not distinguish. It does appear that heavy viral load does correspond with negative outcomes.
- Erick Matsen
They think that lots of viruses can either cause cell death or transition to cancer.
- Erick Matsen