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At #MinneBar, working up the nerve to join a group of people I've never met who all know each other.
If you're at #MinneBar and care about community, OSS leadership, Gentoo, Google Summer of Code, or good beer, find me! My talk's at 12pm.
@minnebar: Check out OpenConferenceWare -- http://groups.google.com/group... -- used successfully by #osbridge and #lpc
Prepping for my talk tomorrow at #MinneBar: "Assholes are killing your project"
Enjoying the last few hours of my birthday. Thanks for all the love!
Early to bed and early to rise and you'll be groggy when everyone else is wide awake. (via @anantn)
NIH Grant Writing Tips – #1 - http://morganonscience.com/grantwr...
Can One Bad Apple Ruin it for the Middle Men? - http://redmonk.com/sogrady...
11 Ways to Influence People Online and Make Them Take Action - http://www.doshdosh.com/ways-to...
Protein Geometry Database: a flexible engine to explore backbone conformations and their relationships to covalent geometry -- Berkholz et al., 10.1093/nar/gkp1013 -- Nucleic Acids Research - http://nar.oxfordjournals.org/cgi...
Protein Geometry Database: a flexible engine to explore backbone conformations and their relationships to covalent geometry -- Berkholz et al., 10.1093/nar/gkp1013 -- Nucleic Acids Research
"The backbone bond lengths, bond angles, and planarity of a protein are influenced by the backbone conformation (phi, psi), but no tool exists to explore these relationships, leaving this area as a reservoir of untapped information about protein structure and function. The Protein Geometry Database (PGD) enables biologists to easily and flexibly query information about the conformation alone, the backbone geometry alone, and the relationships between them. The capabilities the PGD provides are valuable for assessing the uniqueness of observed conformational or geometric features in protein structure as well as discovering novel features and principles of protein structure. The PGD server is available at http://pgd.science.oregonstate.edu/ and the data and code underlying it are freely available to use and extend." - Donnie Berkholz from Bookmarklet
My paper just came out as advance access for the Database Issue of Nucleic Acids Research! Let me know if you're interested / have any questions. - Donnie Berkholz
Congrats! - Steve Koch
Congratulations! - Ruchira S. Datta
Another paper of mine was published today! That marks the 2nd in a month. It's about the Protein Geometry Database. http://nar.oxfordjournals.org/cgi...
@jzb: Seen LimeSurvey? There was a nice talk by some of its devs at the GSoC summit
Watching a parkour competition on MTV2. Urban acrobatics -- pretty amazing stuff!
"Practically anyone who published anything requiring a biomolecular image used PyMol," and its author just unexpectedly died. bit.ly/1a9Ryk
11/04/09 PHD comic: 'Command structure' - http://www.phdcomics.com/comics...
Funny quote: Whenever someone says "I'm not book smart, but I'm street smart", all I hear is "I'm not real smart, but I'm imaginary smart".
The trough of disillusionment for Ubuntu? - http://blogs.gnome.org/bolsh...
"The Hype Cycle describes the way that new technologies and projects are perceived over time, if they do a good job of handling themselves, going from a technology trigger, inflated expectations, disillusionment, enlightenment, before arriving at “the plateau of productivity” – a state where there is no more hype and the new technology is simply a normal part of our lives." The perception over the past few years that Gentoo is dying is in reality Gentoo's arrival at the plateau of productivity. Hype has gone away and remaining is a distribution with a true niche that fits into the broader Linux ecosystem. - Donnie Berkholz
The trough of disillusionment for Ubuntu? - http://blogs.gnome.org/bolsh...
@sogrady: You might like this post, "Distributions *are* the strength of Linux" -- http://blog.flameeyes.eu/2009...
Diego E. Pettenò: Distributions *are* the strength of Linux - http://blog.flameeyes.eu/2009...
Finally got a ticket for @MinneBar today. If I missed this big of a local conf, I'd be a pariah even among geeks like me.
@minnebar: Sweet, my Yahoo Pipes feed worked like a charm! I published it for anyone else to use if they need tickets: http://pipes.yahoo.com/pipes...
@minnebar: OK, will do. Hacked up an RSS feed w/ Yahoo Pipes to tell me when the page doesn't say Sold Out anymore.
Bummed that I'm gonna miss @minnebar because I just moved back to MN and didn't hear about it till tickets were gone.
Open source Skype client under development - http://lwn.net/Article...
A little creeped out. How could Facebook know to suggest as a friend some random person who I've had one email conversation with on Gmail?
Less than Free - a good article about Google, Android and the GPS market http://abovethecrowd.com/2009... (via @storming)
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