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Help me find a good, free transcription factor binding site database for prokaryotes?
Ruchira S. Datta liked this
I haven´t use it yet, but it claims to include a curated and unique collection of transcription factor binding sites from prokaryotes. http://prodoric.tu-bs.de/
- Nicolas Palopoli
EcoCYC is good, but only for E. coli http://biocyc.org/ECOLI...
- Nick Loman
The Warren L. DeLano Memorial Award for Computational Biosciences - http://bytesizebio.net/index...
Mike Chelen, Brian Krueger - LabSpaces, Jean-Claude Bradley and 9 other people liked this
Mandelbulb: The Unravelling of the Real 3D Mandelbrot Fractal - http://www.skytopia.com/project...
Abstract | A theoretical approach to spot active regions in antimicrobial proteins - http://www.biomedcentral.com/1471-21...
PLoS ONE: Deep Sequencing of Viroid-Derived Small RNAs from Grapevine Provides New Insights on the Role of RNA Silencing in Plant-Viroid Interaction - http://www.plosone.org/article...
Apparently the future of cellphone communications involves a lot of gang-signs - http://www.pranavmistry.com/project...
Byte Size Biology » The Genomic Ark: 10,000 vertebrate genomes - http://bytesizebio.net/index...
Lucas Brouwers and Mickey Kosloff liked this
Warren DeLano of PyMol fame has passed away. Very sad news. http://ff.im/b2wPj
Announcement on the CCP4 mailing list: https://www.jiscmail.ac.uk/cgi-bin...
- Iddo Friedberg
standardized-velvet-assembly-report a set of scripts and a Sweave report used to iterate through parameters and generate a report on Velvet-generated sequence assemblies - http://code.google.com/p...
Brad Chapman and Greg Tyrelle liked this
How to Reject a Paper: Advice from a Chain Letter - http://scienceblogs.com/sunclip...
Mickey Schafer, laura, Khader Shameer and 8 other people liked this
15 Awesome Ultramodern Fireplaces - http://multifuelstoves.org/2009...
Byte Size Biology: Open Access: what’s in it for me? #openaccess - http://bytesizebio.net/index...
Jason Stajich and OpenSci Info liked this
VENTER'S ON A BOAT - http://www.youtube.com/watch...
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Jason Stajich, Steve Koch and Jason Winget liked this
NSFW lyrics. Headset may be required
- Iddo Friedberg
from Bookmarklet
Byte Size Biology » Short Bioinformatics Hacks: Glimmer Splitter - http://bytesizebio.net/index...
Wladimir Labeikovsky, Khader Shameer, Andrew Perry and Neil Saunders liked this
Richard Dawkins and Francis Collins on Colbert Nation - http://bytesizebio.net/index...
Mike Chelen liked this
Hulu for Linux. Way cool. - http://www.hulu.com/labs...
Benjamin Tseng, Mike Chelen and Chris Lasher liked this
there's even a 64bit version. still a little choppy on older systems
- Mike Chelen
Byte Size Biology » Coming soon to an inbox near you #openaccess #openaccessweek #oaw09 - http://bytesizebio.net/index...
Bill Hooker and Mickey Kosloff liked this
Byte Size Biology » Weekly poll: favorite wolf metric? - http://bytesizebio.net/index...
Byte Size Biology » More on Arctic Warming - http://bytesizebio.net/index...
Mickey Kosloff liked this
Byte Size Biology » Blog Action Day: the Methane Pulse - http://bytesizebio.net/index...
Khader Shameer and Mickey Kosloff liked this
Kyoto: Who’s On Target? - http://www.informationisbeautiful.net/2009...
Mike Chelen, Mickey Kosloff and Pedro Beltrao liked this
Byte Size Biology » A bioinformatician’s peeves (some of them) - http://bytesizebio.net/index...
Andrew Perry, Mickey Kosloff, Khader Shameer and 9 other people liked this
Could you have picked a more fitting picture with which to conclude that post? I laughed so hard. What's the source of that?
- Chris Lasher
Nice post, also applies to wet science- must contact all those collaborators and tell them what happened to th samples they sent...
- Richard Badge
from Nambu
@Chris it's one of those meme-ish pics that are everywhere. Don't know the source.
- Iddo Friedberg
from Android
Hilarious - perfect for hitting the trenches on a Monday morning. I'm always trying to instill in wet lab scientists that bioinformatics approaches are experiments just like any other and should be documented as such. Actually, I think bioinformaticists are often just as cavalier rarely taking good notes of their workflow.
- Todd Harris
Two Good Reasons To Always Read the Methods Section of a Scientific Paper - Boing Boing - http://www.boingboing.net/2009...
Mike Chelen, Mickey Kosloff, Anders Norgaard and Andrew Clegg liked this
Trying very hard not to use "paradigm shift" or "revolutionary" in a grant application. Would welcome any non-superlative-riddled suggestions.
Mickey Kosloff, Benjamin Tseng, suelibrarian and 6 other people liked this
"This is really freaking awesome, and so am I, so gimme the money already you flea-bitten bean-counters!"
- Bill Hooker
You should also claim that you will cure cancer within five years and extend the average human lifespan to 150. Side-effects should include dramatically lowered risk of heart disease and increased sexual pleasure.
- Bill Hooker
I have always found the following useful: "Darling fascist bully boy, give me some more money, you *******. May the seed of your loin be fruitful in the belly of your woman, [Iddo]." - http://en.wikiquote.org/wiki...
- Andrew Lang
The magic word is: "collaborative"
- Eric Jain
is "novel" likewise overused? myself, i'm partial to "boom" a la steve jobs ^_^
- Wladimir Labeikovsky
Non-traditional? Creative? Imaginative? Innovative? But why do I even try when Bill already has the best answer? :-)
- Björn Brembs
Thanks. I accepted all your suggestions. My grant proposal now reads like a Penthouse Forum letter written by a slightly retarded version of Richard Morgan. I hope the reviewers like it.
- Iddo Friedberg
This will be a turning point for your career Iddo, mark my words.
- Bill Hooker
Hopefully you used "bench to bedside" as well
- Deepak Singh
from iPhone
@Deepak, since we're on the Penthouse theme, that does sound like an adult film title now that you mention it..
- Shirley Wu
from twhirl
Automatic negative karma if you use the word "collaboratory". Or cyber. Automatic rejection if you combine the two as cyber-collaboratory.
- Dan Gezelter
from iPhone
Cyber-collaboratory also sounds Penthouse appropriate
- Deepak Singh
from iPhone
Iddo: one approach is to focus on describing the manner in which it is "revolutionary" while using the term itself one time or less
- Mike Chelen
The magic words to use are whatever your evaluation criteria are...
- Donnie Berkholz
Groundbreaking, Breakthrough, Cutting edge... try to avoid words like "bullshit"
- Alexey
You could try starting out the Background and Significance section as follows: "Before I go any further, let me first describe myself and my [collaborator]...We are both in our mid-20s, and are extremely muscular and athletic, with tanned, sculpted bodies, luscious locks of blonde hair, and tight, shapely buns." http://www.theonion.com/content...
- Steve Koch
Continuing along the lines suggested by Steve be sure to include a phrase beginning with "needless to say"
- Maureen
Letters of Note - http://www.lettersofnote.com/
Blog Action Day 2009: (October 15) Climate Change - http://www.blogactionday.org/
Byte Size Biology » Music: Lulu and the Lampshades - http://bytesizebio.net/index...
Byte Size Biology » Weekly poll: Replicators First vs. Metabolism First - http://bytesizebio.net/index...
ashish, Mike Chelen, Wladimir Labeikovsky and Alejandro Montenegro liked this
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