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ISMB/ECCB
TT16: Patricia Whetzel - Ontology Services for Semantic Applications in Healthcare and Life Sciences
Trish has recorded her talk as a screencast as she wanted to do a demo, and she can't trust the wireless - true enough! - Allyson Lister
RESTful services for BioPortal: http://rest.bioontology.org/bioport... (Note this is the prefix for all services, and if you just go to this URL there isn't anything visible) - Allyson Lister
Can store ontologies in OWL, OBO and Protege frames formats. - Allyson Lister
There are also ontology widgets that you can put on your own site, including jump-to feature and term selection widget. This latter one is especially useful because it allows your web app to use term auto-complete without having to code it yourself! - Allyson Lister
The search function is especially important for ontology re-use. For instance, if you're developing a new domain ontology, then you want to make sure you don't reinvent the wheel - Allyson Lister
As with all of these functions, the search features are available both via the website and programmatically - Allyson Lister
BioPortal also allows you to annotate, or add notes, to ontologies. - Allyson Lister
Nice - a tag / term cloud for annotation - Allyson Lister
You may see duplicates in the tag cloud - designed to be this way to show that more than one ontology has that term. - Allyson Lister
they have a visualization of the hierarchy that is dynamic and you can play with. - Allyson Lister
Questions? support at bioontology.org - Allyson Lister
I was wondering who Patricia was ;) - Frank