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Phil Lord
SIG: BioOntologies. Annotations of SBML Models through Rule-Based Semantic Integration. Allyson Lister, Newcastle University
Working on telomere systems biology models - Phil Lord
SBML allows linking to the underlying biology, but this is hard - Phil Lord
@Phil Who is presenting this? - Duncan Hull
Opps -- it's Ally. That's why she hasn't put the discussion up:-) - Phil Lord
Tempted to comment since we have a 20 minute window where Allyson cannot reply... - Oliver Hofmann
erm, yes, bit embarrasing -- not sure how they missed that error in the programme. Who are the damn chairs anyway? - Phil Lord
Take data sources, turn them into OWL with XMLTab from protege - Phil Lord
The use SWRL to map them to a common ontology, and SQWRL to query - Phil Lord
System extracts data for MIRIAM guidelines - Phil Lord
And interaction data that was new to the modeller - Phil Lord
@Oliver - you commented, but didn't comment further? :) - Allyson Lister
Phew - that was actually sort of fun. Thanks to the audience! - Allyson Lister
@Allyson: Tempted! Also frantically trying to keep up with short-seq sig :p - Oliver Hofmann
Blog post (no, I didn't blog my own talk - this is just a link to the paper and back to this thread): http://themindwobbles.wordpress.com/2009... - Allyson Lister
Slides for this talk are now available from slideshare: http://www.slideshare.net/allyson... Enjoy! :) - Allyson Lister