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Lars Juhl Jensen
Research professor in disease systems biology at the NNF Center for Protein Research in Copenhagen. My specialty is data is and text mining.
Google Wave is coming of age: I have just received the first spam
Google opens up its JavaScript development toolbox to all - http://arstechnica.com/open-so...
Peter Miller and Ruchira S. Datta liked this
Building Chempedia: A RESTful Web API for Chemical Information - http://depth-first.com/article...
Peter Miller liked this
Building Small Curated Databases versus Large Data Collections: ChEBI vs ChEMBL - http://www.chemspider.com/blog...
Peter Miller, Konrad Förstner, Michael Kuhn and Duncan Hull liked this
"It is MUCH harder to curate larger databases"
- Duncan Hull
Predicting new molecular targets for known drugs - http://www.nature.com/nature...
Ed Millard, Khader Shameer, Matthew Todd and 10 other people liked this
The title is a bit generic, isn't this what Phil Bourne's been doing?
- Ruchira S. Datta
I think this is an extension of their (Kieser et al) previous work with SEA
- Rajarshi Guha
Nature has a story on this in their news section: http://www.nature.com/news...
- Michael Kuhn
Is this using Lasso or similar program? Interesting appearance of DMT as a molecule of interest - I have a student doing a report on it this term http://getcheminfo.wikispaces.com/Adam+My...
- Jean-Claude Bradley
Uses SEA http://sea.bkslab.org/
- Rajarshi Guha
Thanks Rajarshi - looks like another cool online resource to explore
- Jean-Claude Bradley
That's cool. How likely is the top match to be a real inhibitor?
- Andrew Lang
We're trying to run our virtual library of Ugi products we can make in my lab http://usefulchem.wikispaces.com/UClib00... I hope that isn't too large a task
- Jean-Claude Bradley
We did some of this validated cross-target prediction also http://www.nature.com/doifind...
- Matthew Todd
That's awesome Mat! What would be the next step to processing our Ugi product library on the TDI kernel?
- Jean-Claude Bradley
RT @konradfoerstner "Secret copyright treaty leaks. It's bad. Very bad." http://www.boingboing.net/2009... (via @FranziskaHeine) #ACTA #web
Anders Norgaard liked this
@Villavelius I often have the feeling that thinking clearly is what causes me to become grumpy ;)
Analysis: Limited agreement among lists of Cdc28p substrates - http://larsjuhljensen.wordpress.com/2009...
Neil Saunders and Pawel Szczesny liked this
All three manuscripts submitted for the 2010 NAR database issue have now been accepted. Happy days :-)
Hari, Mike Chelen, Peter Miller and 4 other people liked this
Oh bother - talking to NAR about writing something on data licensing was on my list of things to do from last year. Guess I missed the boat again :-(
- Cameron Neylon
Cameron: don't worry, data licensing will not stop being in need of explanation any time soon ;D
- Mike Chelen
Why thankyou Mike, you really know how to brighten my day up...
- Cameron Neylon
$5,000 Open Access fee in Nature Communications, and even then you can only choose between CC-BY-NC-ND and CC-BY-NC-SA?!
Mike Chelen, Pedro Beltrao and Anders Norgaard liked this
it's either a huge increase or huge decrease in the open access fee for nature publishing, depending if you consider their old price to be infinity or zero :D
- Mike Chelen
Dual regulation by pairs of cyclin-dependent protein kinases and histone deacetylases controls g1 transcription in budding yeast. - http://www.ncbi.nlm.nih.gov/entrez...
Mike Chelen liked this
Farhad Manjoo thinks Google Wave is too complicated - http://www.slate.com/id...
Mike Chelen liked this
Drupal and PubMed - http://archive.nodalpoint.org/2008...
Mike Chelen liked this
nicely done explanation of how Drupal can import content via RSS from many sites such as PubMed
- Mike Chelen
Advice from Google on large distributed systems - http://glinden.blogspot.com/2009...
Mike Chelen liked this
Zen and the Art of Ruby Programming :: Add code highlighting to your Google Waves - http://antoniocangiano.com/2009...
Mike Chelen liked this
Thoughts on the Whitehouse.gov switch to Drupal - http://radar.oreilly.com/2009...
Mike Chelen liked this
Facebook owned FriendFeed losing ground - http://digg.com/tech_ne...
Mike Chelen liked this
unique visitors is an important metric, it would also help to look at how long users spend on the site
- Mike Chelen
The Futility of Commenting Code - http://lingpipe-blog.com/2009...
Ruchira S. Datta, Neil Swainston and Neil Saunders liked this
Something to think about when designing web interfaces: http://www.useit.com/alertbo...
Ruchira S. Datta liked this
Evolution of biomolecular networks — lessons from metabolic and protein interactions - http://www.nature.com/nrm...
Mike Chelen, Peter Miller, Roland Krause and 2 other people liked this
Treating User Myopia - http://www.codinghorror.com/blog...
Bayesian Modeling of the Yeast SH3 Domain Interactome Predicts Spatiotemporal Dynamics of Endocytosis Proteins - http://www.plosbiology.org/article...
Peter Miller and Pedro Beltrao liked this
@phylogenomics I think they say "evil scientists want to hurt you"
Post #108 - Write down your allocation strategy! - http://genyretirerich.typepad.com/blog...
Pull quote: How do you prevent these mistakes with a written strategy? * Each time you are tempted to do something that goes against the strategy, take the written strategy out of your file cabinet. * Roll it up carefully. * Hit yourself over the head with the rolled up strategy. * Re-read the damn strategy. * Remind yourself that you wrote it for a reason. So you wouldn’t forget your long term goals and do something stupid.
- Lars Juhl Jensen
Blue is for losers. - http://www.ncbirofl.com/2009...
Sequence and Structure Signatures of Cancer Mutation Hotspots in Protein Kinases - http://www.plosone.org/article...
Mike Chelen and Yann Abraham liked this
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