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Matt Leifer › Comments

Cameron Neylon
Advice request: What is the best approach to exposing a publications list online. Any good tools for generating html/xml/rdfa?
Bibsonomy has a good mechanism if you have your pubs in its database (it can import bibtex and other things) and tag them appropriately. E.g. http://www.bibsonomy.org/publ... or http://www.bibsonomy.org/export... - Alec
Incidentally this will be in the context of a wordpress install: http://cameronneylon.net/publica... in its current form will severely damage any semantic web cred I have :-) - Cameron Neylon
Bibsonomy also has an API and wordpress plugins. I think Mendeley has 'badges' as well, but I haven't used them. - Alec
Mendeley doesn't really deliver what I want at the moment but I'll check out the bibsonomy plugin What I'm really after is exposing some nice dublin core or CoINS records, or even better having something that will take something along the lines of [doi="******"] and format the lot for me. - Cameron Neylon
There is also bib2html which is close to what I want but just formats the citation http://wordpress.org/extend... - Cameron Neylon
....mmm but doesn't seem to work for some reason.... - Cameron Neylon
I have used bib2html on my site and it works fine (see http://mattleifer.info/researc...). What exactly is the problem you are having? - Matt Leifer
I agree that it would be nice to have more than just reference formatting in wordpress, e.g. ability to export in a variety of formats, but I was never able to find a plugin that does that. Drupal has an excellent bibliography module (http://drupal.org/project...) and there is also a module for exposing the data using OAI-PMH. I don't think it is worth the pain of converting a site... more... - Matt Leifer
It is also worth noting http://publicationslist.org in this context, since they do a pretty good job of exposing the individual records in a variety of formats. However, as far as I am aware they have no API for harvesting the metadata. Also, it seemed to be heavily reliant on pubmed when I tried it, which is pretty useless for a physicist and I didn't feel like entering all the metadata by hand. - Matt Leifer
Cameron, this seems like a simple thing for Mendeley to do. I know they're working on proper markup for embeddable collections. - Mr. Gunn
Matt: I'm running Wordpress 2.9 and when I run bib2html I get an error saying "function.usort requires an array" or something similar. I'm presuming that what is happening is that at line 73 in bib2html.php something is going wrong with list($preamble, $strings, $entries) = $parse->returnArrays(); then a few lines further down $entries doesn't exist when requried. I've tried a bunch of... more... - Cameron Neylon
Mr Gunn: I imagine Mendeley could. It's not a trivial problem though as you're mixing semantic information with formatting information where the user will probably want control over the latter. This is actually a really fundamental underlying problem with the semantic web - there are very few tools that make it easy for the average user to put thi structure in and then have some widget... more... - Cameron Neylon
wrt taking an identifier, running it against a service, and getting formatted stuff back... I'm wondering if your institution has an SFX server (or equivalent?) - you could then see if there's a batch mode... ugly, but it would be like doi > sfx > openurl > COINS generator .... - Christina Pikas
Well thus far I've managed to handcraft some functional rdfa for one entry (top entry at http://cameronneylon.net/publica...) - except for the minor point that it doesn't validate, I think just because my DOCTYPE headers are wrong. I'm tempted to write a crude bibtex to rdfa converter for publication lists. There are some reasonable bibtex libraries out there, but as far as I can tell... more... - Cameron Neylon
I played around with citeline some time back. Have you seen it? http://citeline.mit.edu/ - Mr. Gunn
Matt Leifer
Britain's Conservative Party Offers £1 Million Prize for New Crowdsourcing Platform - http://www.readwriteweb.com/archive...
"This is typical of the mainstream UK political approach to IT issues. If you want something done then you just throw boatloads of money at private companies rather than having someone in government who actually understands IT. Look how well that worked out with the new NHS computer system, the result of which mainly seems to be wasting half the appointment time as a frustrated consultant tries in vain to pull up test results. OK, that may have been Labour's fault, but I don't honestly believe that any of the main political parties have a clue about IT. The reality of the situation is that you could easily put together a site of this type of crowdsourcing/social networking site using existing open source web-tools, e.g. Drupal, Elgg, etc. If you paid a developer to work on it for a month or two and made use of the open source community then you could have a working site for a fraction of a million. Also, the idea of a "competition" for this sort of thing is just silly political..." - Matt Leifer
"This is typical of the mainstream UK political approach to IT issues. If you want something done then you just throw boatloads of money at private companies rather than having someone in government who actually understands IT. Look how well that worked out with the new NHS computer system, the result of which mainly seems to be wasting half the appointment time as a frustrated... more... - Matt Leifer
Ruchira S. Datta
Enjoying my new nook.
IMG_3944.jpg
IMG_3943.jpg
Also deriving a great deal of satisfaction from removing the air bubbles from under the protective film, probably because it's hard work. - Ruchira S. Datta
Your hands-on review to counter Pogue's is pretty important to me, thanks. - Daniel Dulitz
How does it feel to read PDFs of papers on it? Is the size and clarity good enough? - Karthik Raman
Haven't done that yet, though I've downloaded epubs from the 19-th century from Google Books. (There are a few OCR errors, but this is otherwise very nice.) - Ruchira S. Datta
Just tried reading a PDF of a paper. The text is much more pleasant to read than on the Macbook Air, but there are too many snafus associated with reformatting the PDF (in two column format) to fit the form factor of the nook, so I probably won't be doing this. I expect the Que would be better for that sort of thing. - Ruchira S. Datta
I am waiting for Que since last year. - ashish
Thanks a lot for the update! - Karthik Raman
That's a shame. Some ebook reader should try to get some special formatting hooks into LaTeX. :) - Ryan Moulton
In case of a large amount of Ebook , I worry about eyestrain.It's good to read about time gap, I think. - Ami Iida
Ami, I've read plenty of e-books on computer screens and the eyestrain with e-ink is much less, as the display is not backlit. - Ruchira S. Datta
Second what Ruchira said about eye strain. You can read an e-ink based device for hours - Deepak Singh
I mostly want one to carry/read articles (PDF) but I haven't decided on one. I could go for the DX if the price drops a bit. - Pedro Beltrao
I agree with Pedro -- if the DX weren't so expensive I would have one already. I have a 2-hour commute and a huge stack of literature to read, and the DX would make it very easy to put the two together. - Bill Hooker
Pedro the kindle2 does native PDF now (or so I think) - Deepak Singh from iPhone
Will the Kindle2 display pdf files that contains graphs and illustration in "proper" manner? I had one but returned it because it could not display pdf files properly. I am waiting for Ebook reader that would do that. kindle Dx does that but I am waiting for Que and other ebook readers so that I can compare and buy the one that suits my need. Also, I would love to have functionality of having to print straight to ebook reader using wifi or even USB will work. - ashish
within limits. One of my friends has his entire library on his Kindle. The new firmware is the same as the DX to the best of my knowledge. - Deepak Singh from IM
To be fair, I had Kindle2 before the firmware update for pdf was pushed. I am compelled to try it again but probably wait for reasons mentioned before. - ashish
Not a bad idea. The scientific capable reader is still a bit away - Deepak Singh
There is a website that will convert any pdf on the web to be viewed an an ebook on the Stanza iPhone app http://epub2go.com/ - Christian Burns
I am waiting for the ebook reader that syncs with Papers in with the same ease an ipods syncs with iTunes. Oh Apple, where is your ebook reader? - Matt Leifer
and you haven't put in line ordinary book... - A.T.
Itachi
"MathJax is an open source, Ajax-based math display solution designed with a goal of consolidating advances in many web technologies in a single definitive math-on-the-web platform supporting all major browsers." - Itachi from Bookmarklet
Want! when will it be available? fall 2009 is almost over - Christina Pikas
Almost? I'd say December qualifies as winter. - Matt Leifer
It needs a way to copy and paste, like Wolfram Alpha has. - raphaeL
Hmm, I wonder if W|A takes LaTeX? It'd be REALLY nice if W|A outputted into LaTeX, since so many scientists, mathematicians, and students use it - Itachi
nope, uses Mathematica - raphaeL
Matt: might have been referring to release of the preview: http://www.mathjax.org/... - Mike Chelen
Mike: No, on http://www.mathjax.org/?p=88 they stated that the "first major release" would be available in the fall. Since it is open source, I am not sure why they are not providing a public facing repository as a developer preview prior to the official release. It looks useful already and it would benefit them to enlist people in bug hunting. - Matt Leifer
Matt: they are providing a public facing repository: http://sourceforge.net/project... - Dan Hagon
Aha, thanks for that. I didn't see the link on the mathjax site. - Matt Leifer
Cameron Neylon
What should social software for science look like? - http://blog.openwetware.org/science...
FF doesn't meet all your requirements but it does seem to work well compared to the specialized services - at least in some fields - Jean-Claude Bradley
Well I guess that's not surprising given my biases - at some level I'm more interested in what people think I've missed than my own predjudices though. FWIW I think a clever combination of DropBox, FriendFeed and some of the elements from StackOverflow, with perhaps a bit of the coordination ability of posterous would go very close to the mark. Still need better network and filter management tools though - somehow they need more configurability but less configuration... - Cameron Neylon
OpenWetWare is looking to make a major overhaul in the next couple months, and has a bit over 1 year of funding left. I feel like this is an opportunity to at least try to do some of the things that most people think are necessary for SS4S. Not perfect, but better so that we'd have a better idea of what is really needed. I think the time frame (now; already funded) makes "not perfect" a... more... - Steve Koch
I really like what you said in point 10. It's something that I've seen far too many scientists being cavalier about. Federation, open protocols and specifications, along with open source, are very important to science. - Christopher Granade
Might be worth seeing how far sourceforge meets your criteria. Certainly it's totally based around objects, i.e. software projects, and there are lots of high quality open source science projects whose code is hosted there. Although it has community/social networking tools I've personally never really used these and most visits I've had to sf have either been fleeting (to download... more... - Dan Hagon
Steve, absolutely we need to keep evolving with the resources available. OWW is a great place to do that. - Cameron Neylon
Dan, there was a conversation around using Github in a similar way some months ago and I think these things have a lot of potential as a back end. I think federation is important enough that you'd want to use a DVCS rather than SVN as a back end though. - Cameron Neylon
Sourceforge has several DVCS options in addition to svn these days. Although github is great I would be wary of anything that requires scientists to learn the intricacies of git. hg and bzr are much more friendly to non-developer types that don't need the full flexibility of git. I've had some success using them to collaboratively author LaTeX documents. - Matt Leifer
Matt, ok, I'm behind the times (nothing new there!). The intracies are less of an issue as this would only be a back end. No SS4S that any significant proportion of scientists use is going to look _anything_ like a code repository. To start with your average scientist is never going to touch a command line. If you're dealing in Latex you're already talking about a minority I'm afraid.... more... - Cameron Neylon
There are several wikis that use DVCS as a backend. This could be a starting point for developing the type of thing you are interested in. - Matt Leifer
LaTeX isn't the minority in whole areas of math, CS, physics....I guess that brings up the same old complaint: "science" is defined as all biomed, all the time. I'll try to come up with some more substantive comments though - Christina Pikas
Christina, didn't mean to say it should be excluded just that a non-command line system is non-negotiable so most online VCS aren't going to be good enough as a front end. Support for Word, Excel, video, images, XML and Latex are all non-negotiable characteristics of any such system. - Cameron Neylon
Matt, not sure that a wiki is the right starting point - the document model doesn't seem right to me, although I'm way behind on the most recent developments in Wikis so I may be out of date on that as well. What is in my head is a DVCS back end with APIs providing access from e.g document authoring systems, databases, publishers, whatever. A feed system that looks a bit like friendfeed... more... - Cameron Neylon
I wasn't suggesting actually using one of the wikis, just that they have already done a reasonable job of abstracting the version control functionality (in fact, some of them support more than on DVCS in this way) so there may be some things in the codebase that are useful. It is also an example of taking a command-line DVCS and giving it a more user friendly interface. In addition, if... more... - Matt Leifer
Ah good to know - which do you think are the best examples of these wikis? I should take a look. In any case at this stage I'm just throwing ideas out. Have no resource to actually a build anything at moment. - Cameron Neylon
Is there actually a need for social software for scientists? Or should scientists use and customize the existing social networking tools (FriendFeed, Facebook, LinkedIn, etc.)? - Martin Fenner
I'm beginning to think the main issue will be that business models for consumers services are incompatible with what researchers need. So yes, customise might be better than build but if we have to go down that route we may as well have a good idea of whats required. One person's customisation is another person's build. - Cameron Neylon
I'd be curious what you think of HubZero, Cameron. - D0r0th34
Depends a bit on server setup. For Mercurial I like Hatta, but it requires persistent python processes, i.e. no good for most shared hosts that only allow CGI. There is a list of RCS backed wikis here: http://hatta.sheep.art.pl/Similar projects - Matt Leifer
Cameron, I love and absolutely agree with the necessity of "scientific objects". If you lack those, then (as Martin points out) just use the general purpose sites. In that principle, I think there are some viable networks -- DVCS systems around scientific code, Mendeley around scientific publications, (eventually our BioGPS around genes). But I think we should be developing specific networks appealing to specific groups of researchers, rather than trying to serve the needs of all scientists... - Andrew Su
Andrew agreed, but if these are federated then they can all still talk to each other. I'm thinking more framework than site or single service. Ideally all of these things can be plugged in or wired up together...my concern with general purpose sites is primarily that they don't provide the level of trust and stability that we would expect for "research enterprise" - Cameron Neylon
Just one comment. There are protocols out there that allow different social networks to talk to each other. There are protocols out there that allow web resources to talk to each other. It's not really that hard if everyone supports some basic standards. RESTful API's, OAuth, OpeniD/Facebook Connect/Friend Connect, etc. IMO what's more important is that any sites we design have the... more... - Deepak Singh
@D only really had a chance to have a quick look. First impressions are that it is very slick but looks as though everything has to be on the inside - I don't see much mention of pulling stuff in and out. The multimedia talks are nice but why not pull them in from e.g. slideshare to pick an example. - Cameron Neylon
completely agreed, federation through standards... - Andrew Su
Twitter is far from perfect, but look at the infrastructure that has evolved around it e.g. 3rd party apps, services). You don't get that kind of traction around a social networking site just for scientists. Imagine what email or the WWW would look like if there were separate versions just for scientists. - Martin Fenner from iPhone
Absolutely but that actually means we can build something better, and as long as it hooks into Twitter (RSS/OAuth...Deepak's list basically) we get all the benefits and all of the functionality we want - as well as a way of drawing people in. Assuming this framework is any good of course. Imagine PubMed if it had been built for the consumer web (actually maybe not such a good example... more... - Cameron Neylon
Sort of responding to Deepak a few comments earlier. Something like a social network is useful for at least one reason: recruiting scientists who aren't ready for open science, or cannot communicate openly for one reason or another. So, a reasonably secure way of making data private and shared with a limited network is a good thing, I think. I think ultimately that will lead to much more open science (my own lab started out with a private wiki before doing ONS)... - Steve Koch
Steve, but does it have to be a social network per se, or a site for say sequencing geeks (I am looking at you SeqAnswers) with the appropriate features built in. Social networks don't have to be all in the open. Facebook is a social network. 90% of my communication on there is private and you should see how much of my Twitter usage is DM's - Deepak Singh
Deepak, I think I was just using terminology incorrectly. I was assuming Facebook = social networking. - Steve Koch
Dan Hagon
Curious: Digital Tools for Writing Math - http://smupedagogy.blogspot.com/2009...
"Here are a few ideas on how to write math equations on your computer and how to distribute them to your students." - Dan Hagon from Bookmarklet
Odd that any LaTeX-based solutions are left out entirely. - Christopher Granade
Someone told me that the windows 7 thing uses LaTeX as a backend. - Matt Leifer
My main interest for that blog post was the use of Wacom's Bamboo. I'm curious to know if anyone has any experience of using this specifically for mathematics and if so which third-party software tools they have found to work well with it. - Dan Hagon
Ben Werdmuller
The furore about Facebook privacy is interesting. Other sites (eg Twitter, MySpace, LinkedIn) are really no different.
Yes but Twitter users know that their tweets will be public when they signed up. In my experience, most people chose to sign up for Facebook primarily because everything was locked down to their network. User expectations are very different. - Matt Leifer
Matt Leifer
"Of course it is NP hard because NP is in QMA and the problem is complete for QMA. However, that does not mean that it is NP complete, since to be complete the problem has to actually be in the complexity class it is hard for. This problem is almost certainly not actually in NP, unless you believe that QMA is equal to NP, which seems very unlikely to me. It seems that we may be talking at cross purposes here. I thought that you were implying that finding ground state energies of local quantum Hamiltonians is no harder than the equivalent problem for local classical Hamiltonians. I simply don't see how this can be the case, because it would be a huge step towards proving that classical and quantum computation are equivalent. Perhaps I need to look at this Hilbert-to-Kähler pullback business more closely, but surely the resulting classical Hamiltonian must have some pathological properties." - Matt Leifer
Matt Leifer
"I would be very surprised if the Hamiltonian problem discussed in http://arxiv.org/abs/0705.4077 is in NP." - Matt Leifer
Matt Leifer
"Hmm, but what about all the results showing that determining the ground state energy of a general local Hamiltonian, even in 1D, is QMA complete? Admittedly, these rely on artifically constructed Hamiltonians that are far from what a physicist would call "natural", but, unless you believe that QMA=MA, it does seem to indicate that the quantum problem is much harder than the classical one. It is an interesting project to determine if there are any Hamiltonians encoding QMA completeness that do satisfy various notions of "naturalness", e.g. translation invariance, low Hilbert space dimension of the individual spins, etc. Nevertheless, I wouldn't like to rule out finding such a Hamiltonian in a condensed matter system a priori and, if we manage to build a quantum computer, then we can engineer them anyway. My main problem with your comment is not that there may be no practical problem simulating Hamiltonians that come up in nature, but that you seem to be implying that this means that..." - Matt Leifer
"Hmm, but what about all the results showing that determining the ground state energy of a general local Hamiltonian, even in 1D, is QMA complete? Admittedly, these rely on artifically constructed Hamiltonians that are far from what a physicist would call "natural", but, unless you believe that QMA=MA, it does seem to indicate that the quantum problem is much harder than the classical... more... - Matt Leifer
Matt Leifer
"I don't understand why Hastings' result indicates the opposite Great Truth. There are Hamiltonians in nature that are not gapped. Cluster states do not obey the area law. Local Hamiltonians that have the cluster state used in measurement based quantum computation are not gapped." - Matt Leifer
Matt Leifer
"The derandomization result reminded me of various results in quantum computing which show that you can replace a unitary uniformly drawn with Haar measure by a random circuit composed of Clifford unitaries. Of course, this is not a dequantization, or even a derandomization, since it is just replacing a continuous measure by a discrete one, but perhaps there is a connection to classical derandomization results." - Matt Leifer
Ben Werdmuller
Interesting to see the OriginalSignal style of feed reader become popular again. I vastly prefer inbox-style; what about you?
Can you recommend a good feed reader that uses this style? - Matt Leifer
Matt Leifer
50 Best Physics Blogs | AccreditedOnlineColleges.org - http://www.accreditedonlinecolleges.org/blog...
Bookmarked so I can go back and add some to my feeds later. - Matt Leifer
Anna Croft
any suggestions for good screencast software (the sort for making videos of computer actions ...)?
I like Screenflow for Mac but it costs money. Camtasia for PC similarly is highly recommended. Jing and similar are fine for short videos less than a couple of minutes. - Cameron Neylon
screenr.com is fabulous, runs in your browser, very quick to use, uploads straight to youtube if you want. Has set window sizes which helps you fit your demonstration window to include all the action you want. - Jo Badge
Try http://www.screentoaster.com/ - also runs in the browser, and is apparently free (haven't tried it because I bought Camtasia earlier, which is pretty expensive). - Victor / Mendeley Team
What OS? I like gtk-recordMyDesktop on Ubuntu, others recommend Istanbul. - Neil Saunders
mac osx ... also open to ubuntu for the more technical stuff. browser-based sounds fab! thanks guys :) - Anna Croft
Jing is cool if you want quick, easy and short. - Matt Leifer
I like Jing as well - François Dongier
I use and like Camtasia but it is not free - although the 30 day trial is fully functional - Camstudio is free and might work for recording but not editing - Jean-Claude Bradley
Try Screenr.com - excellent. - AJCann
I recommend ScreenCamera because it makes live real-time screencasts on Skype, UStream, messengers, or wherever you can use a webcam. http://www.pcwinsoft.com/screenc... - PCWinSoft
ISHOWU is quite amazing ..its only US $10 or so. creates very compact H.264 codec using files - Hari
Matt Leifer
Public science lectures: What for? How to? - http://sty.im/E0XKGw
Public science lectures:  What for?  How to?
Summary of a couple of papers on giving effective public lectures and using them in the classroom. - Matt Leifer
Matt Leifer
"Regarding automatic population of metadata, have you tried a services like Papers, Mendeley or CiteULike, all of which can populate a record from the DOI or other identifiers, e.g. arXiv identifier. They are not perfect and require a little manual editing, but both can output bibtex files." - Matt Leifer
Mickey Schafer
Got an invite to Google Wave today from a former student currently doing MA work in the U.K. Woo hoo! Now, I just need to figure out how it works.
There are some wonderful waves and websites. If you are looking for anything specific please let me know. - Holly Rae
If you figure it out, be sure to let everyone else know. :) - Curtiss Grymala
Thanks so much, Matt. Thus far, I've only once hit a key (don't know which it was) which through me into edit mode. Twice. Deleted them, then back to the wave I was on..riding..writing..blipping..what on earth is the proper vocab?! - Mickey Schafer from email
lol! - Mickey Schafer from email
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"There are quite a few wiki engines out there that are backed by a distributed version control system. This means you can easily edit them online using the browser, but also checkout the repository and work with the files in a local text editor. I am working on getting one of these wikis LaTeX and MathML enabled as a possible solution for collaborative paper authoring. I can't solve the hosting problem, but I intend to make the installation as painless as possible, including on cheapo shared hosting accounts.Adapting this to a provide a simple engine should also not be too difficult, although it would not have all the features of Wordpress." - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"I don't think so. If you use a DVCS backend then you could ditch the database completely and just store all the content in flat-files. The DVCS would make sure that the history would be stored efficiently and interacting with a DVCS is similar to dealing with an abstraction-layer.Anyway, I hope to come up with a proof of concept of this within a few months." - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"Hmm, I've had a few email exchanges with Andrew about these issues and the basic difference is that he doesn't seem to buy into the whole web2.0, cloud computing fandango as much as I do. In my view, the distinction between "writing for the web" and "writing for print" is a big red herring. The web is a big place and there is room for putting a variety of content types on it, both long and short form. Also, I think that the distinction between "writing for the web" and "writing for print" will disappear in the near future, particularly as ebook readers get more sophisticated and widely adopted. Turning blogs into books is already quite common, which is something that I should not need to mention on this particular blog. I agree that distributed version control systems are a great solution, but they are not for the faint of heart. A good collaborative tool should offer straightforward web interfaces for the average user, whilst allowing technically inclined users to leverage the full..." - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"Gellmu is really very nice, but it is a bit off-putting for people who are just looking for something to plug into their web-app. For example, I wish someone would come up with an implementation in a language that is commonly used for web programming, i.e. not Emacs Lisp, and I wish someone would write some documentation designed for end users that doesn't assume a lot of knowledge about SGML and LaTeX (or at least doesn't assume that the reader wants to wade through a lot of technical discussion about the SGML philosophy of Gellmu)." - Matt Leifer
Matt Leifer
"Hi, As a Brit who has used Cheers as a goodbye greeting in person and over the phone for many years before email, I deplore the Supernova’s suggestion. You just have a prejudice against British slang. If I have to put up with a “Hi” at the top of every email then you can certainly put up with a “Cheers” at the bottom. Cheers, Matt" - Matt Leifer
Christopher Granade
Anyone want to share their web hosting suggestions with me? Looking to host a small DokuWiki installation-- nothing too big, just some PHP support.
I've had a very good experience with A2 hosting, and they have LaTeX installed on their servers in case you want to use the maths extensions with DokuWiki. - Matt Leifer
@Matt: Thanks for the recommendation. I'll go take a look. BTW, someone else was suggesting somewhere called Nearly Free Speech, and I have to say that even if I don't go with them eventually, their pricing model is fascinatingly different. http://www.nearlyfreespeech.net/ - Christopher Granade
It looks interesting. However, shared hosting is generally so cheap that you shouldn't worry too much about the pricing. Support, flexibility and reliability are much more important. - Matt Leifer
I've been using nearlyfreespeech.net for a couple of years now without any problems. Having said that I've not used it for anything but static web pages up to now. - Dan Hagon
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"Nice to hear from someone in the Mozilla camp about this. I know of one javascript LaTeX->MathML converter, which is called LaTeXMathML. I tried to write an "on-the-fly" LaTeX editor using it, as you described, but it was a nightmare because the script is very buggy and the code is a mess. We really need a new implementation. Somewhat bizarrely, LaTeXMathML works with pages served as text/html already on Firefox because there seems to be a difference between converting client-side and serving a page. Somehow, the browser is "tricked" into displaying the MathML, even though it shouldn't do it according to the HTML4 specification. Strictly speaking, I guess this is a bug, although it is a feature from our point of view. There is also jsMath, which does a similarly good job of client-side mathematics conversion, although it is not using MathML.The main point is that we have had decent javascript technologies for mathematics for quite some time, and yet we have not seen the kind of rich..." - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"I think I understand that application, but I am not sure how it could possibly work. You want to type E=mc^2, for example, into a search box and get back a whole list of articles about relativity. OK, well that example would probably work at the moment because the notation is so standard, but even with semantic markup I don't see how this can possibly work in general due to large differences in notation and terminology for representing the same concept. After all, content MathML and OpenMath may be more semantic than presentation MathML, but they are not magic. They can't tell you that two things are connected if you haven't told them that they are." - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"That is so cool. You could run the output through a MathML->TeX converter and write all the math in your papers by hand. It's almost enough to make me want to buy a tablet PC and switch back to Windows. Anyone know of similar tools for Linux or Mac?" - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"To clarify, there is content MathML and presentation MathML. I believe that content MathML is designed to solve the same problems as OpenMath, but I haven't compared the specifications so I could be wrong about that. In any case, content MathML is in much worse shape than presentation MathML, since we don't have many good translation tools and it would have to be translated into presentation MathML for display in any case.In my opinion, trying to get authors to markup semantics as well as presentation is a losing battle because in most cases people are just trying to get their mathematical content onto the web as quickly and simply as possible. I think this is the reason why both OpenMath and content MathML haven't really taken off, whereas presentation MathML is in comparably good shape. In fact, I am not entirely convinced that marking up semantics within the mathematics itself is an important issue. I mean, does anyone actually have any trouble looking up mathematical concepts in..." - Matt Leifer
Matt Leifer
Displaying mathematics on the Web - http://terrytao.wordpress.com/2009...
"As I see it, we don't actually have a problem with *standards* at the moment, but with *implementations*. MathML is perfectly fine as a standard for displaying mathematics on webpages, but implementing it is still a bit of a nightmare. It will never be an authoring language, but there are plenty of decent ways of converting LaTeX to MathML and webpages could be easily coded to incorporate the original LaTeX markup as well as the MathML. The problems implementing MathML stem from the requirement to serve content as appication/xml, which isn't supported by Internet Explorer, and with the need to install extra fonts. The former is not a problem if you are serving static web pages, e.g. if you just want to convert an existing paper into an HTML+MathML webpage. There are plenty of existing tools that do this well. However, it seems to me that the idea that you might want to embed MathML into content management systems, e.g. Wordpress, MediaWiki, Drupal, etc. and other web-based..." - Matt Leifer
Richard Badge
Thinking about starting a blog: Want to write about science, change and scientists... Suggestions for hosts and good people to look at?
You want to write about the science you are doing or science in general? - Jean-Claude Bradley
Hi Jean-Claude, I guess as a nascent "openscientist" I am still at the awkward stage of thinking about what science I want to do in public... So I guess my blog would be about science in general, at least at first.... Cheers Richard Dr Richard Badge, Lecturer Department of Genetics, Office G8C, Adrian Building, University of Leicester, University Road, Leicester LE1 7RH Tel (Office): 0116 2525042 Tel (Lab): 0116 2523416 Fax: 0116 2523378 On 27 Oct 2009, at 10:25, Jean-Claude Bradley wrote: - Richard Badge from email
T'is the era of experimentation in communication - I am subscribed to you on FF Richard so when you start your blog you'll add its feed here so we all get it automatically? If you were asking about a platform for blogging lots of people are happy with Blogger - very little hassle. - Jean-Claude Bradley
Start at wordpress.com, which gives you an easy route to upgrade to self-hosted wordpress later on. - Matt Leifer
Richard, I have a heap of great links from @BoraZ that he sent to me when I started blogging. Gimme a shout if you want a copy. - Graham Steel
Hmm - some links would be good- still wondering if this is a "learn by doing" situation, but can't resist need to "read around"- thanks for the offer! Richard - Richard Badge from email
Richard - if there is ever an appropriate situation for learning by doing I think this is it - very little downside - Jean-Claude Bradley
Richard - have emailed you Bora's suggested links :) - Graham Steel
Hmm - lots to read and think about here- will get on it once have decent wifi... Many thanks! Richard - Richard Badge from email
Wordpress has a mobile version that displays nicely on the iPhone - blogger looks horrid on iPhone screen. I'd go for wp :-) - Jo Badge from iPod
If I may add my two cents, as Michael Neilson recently posted (http://econlog.econlib.org/archive...), consider the advice for non-fiction writing to be relevant to blog writing, too. I'm likely a bit more cautious in this area and so not a huge fan of "figure out what you want to say while you're saying it" -- I'd recommend considering what it is you'd like the blog to do for you, perhaps from the perspective of what kinds of questions/ conversations do you want to conduct publicly. - Mickey Schafer
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