Morgan - FriendFeed

Interesting! For applicant filtering @morungos MT @MatthewBashton: @darrenjw use of all caps in Perl is frowned upon http://www.perlmonks.org/index...

February 26 from Twitter - Comment - Like - Share

Dear every applicant ever: Java and Perl are not acronyms and don't need to be all caps. Also, no switching between JAVA and Java.

February 26 from Twitter - Comment - Like - Share

As much fun as #AGBT13 was, it's great to be home in my bed at a sensible hour.

February 24 from Twitter - Comment - Like - Share

Grimmond: Widespread inactivation of genes in pancreatic cancer – surprising. #AGBT13

February 22 from Twitter - Comment - Like - Share

RT @kennamshaw: OMG! Just noticed that #agbt13 is trending! woohoo @obahcall @sciencestream @LabSpaces I'm a little late to noticing!

February 22 from Twitter - Comment - Like - Share

Anyone find a good trace of Andrew Farrell online so we can watch for the release of his reference free variant caller? #AGBT13

February 22 from Twitter - Comment - Like - Share

RT @bioinfosm: #AGBT13 @MarkDePristo sample size is a limitation to better calling; but then ensuing massive data aggregation becomes a challenge #NGS

February 22 from Twitter - Comment - Like - Share

DePristo: error process of a sequencer is complex, orders of magnitude different within a single run of an instrument. #agbt13

February 22 from Twitter - Comment - Like - Share

#AGBT13: anything interesting in the Beckman-Coulter talk?

February 22 from Twitter - Comment - Like - Share

RT @NorthernAutumn: CM HIV 10K copies of viral RNA clone had <5% of reads aligning to host genome & covered viral genome #agbt13

February 22 from Twitter - Comment - Like - Share

RT @OmicsOmicsBlog: #AGBT13. Rothberg: I know there's over/under bets on how many times I say Moore's Law. If you took the over, you're going to win.

February 22 from Twitter - Comment - Like - Share

RT @GenomeMedicine: Recent review from Gholson Lyon & Kai Wang on clinical challenges & informatic tools (inc. VAAST) is at http://genomemedicine.com/content... ($) #agbt13

February 22 from Twitter - Comment - Like - Share

Yandell: VAAST – scores all coding variants regardless of conservation, looks at change in AA in disease gene DB vs. 1000 genomes #AGBT13

February 22 from Twitter - Comment - Like - Share

RT @bioinfosm: RT @pathogenomenick GR: Found 8000 phantom variants in report from GATK, triggered this blog post http://blog.goldenhelix.com/... #AGBT13

February 22 from Twitter - Comment - Like - Share

RT @omespeak: JS: The 27 mutations were concentrated in 16 genes. One gene (CHD8) alone could be responsible for 1in300 autism cases. #AGBT13

February 22 from Twitter - Comment - Like - Share

Shendure: Can better detect deletions with molecular inversion probes, mostly due to read depth ~1000x compared to exome ~30x. #AGBT13

February 22 from Twitter - Comment - Like - Share

Scherer: Canadian Personal Genome Project http://www.personalgenomes.ca/ #AGBT13

February 22 from Twitter - Comment - Like - Share

RT @kennamshaw: AM: starts w/ review of 2011 Nature paper (474:609-615- data belong to you- 100% publicly available- SNP, exome, methylation, clin) #agbt13

February 21 from Twitter - Comment - Like - Share

http://dgidb.genome.wustl.edu - Search for drug-gene interactions by gene name @malachigriffith #AGBT13

February 21 from Twitter - Comment - Like - Share

RT @GenomeNathan: Glusman: Let's not just sit on hundreds of genomes; let's find ways to share them ethically and productively. #agbt13

February 21 from Twitter - Comment - Like - Share

Glusman: Kaviar - Database of known variants - human genomic variants collected from many sources http://db.systemsbiology.net/kaviar... #AGBT13

February 21 from Twitter - Comment - Like - Share

RT @chm2042: the placenta's closest match on the microbiome is the mouth #agbt2013

February 21 from Twitter - Comment - Like - Share

RT @kennamshaw: KA: found 329 geniuses, 728 species, no infection in patient- clear that placenta harbors non pathogenic commensalism micro biome #AGBT2013

February 21 from Twitter - Comment - Like - Share

RT @illumina: Kjersti Aagaard, Baylor: forget what you got from mom and dad, we inherit 2-4 million genes from our microbial friends #AGBT13

February 21 from Twitter - Comment - Like - Share

Nice talk, Worthey! One to watch, planning on taking WGS turnaround from 2wks -> 2days, specific suggestions to reduce time overall #AGBT13

February 21 from Twitter - Comment - Like - Share

Storage ~$1200. RT @bioinfosm: #AGBT13 Awesome cost slides towards the end of the talk #WGS ~$1500, interpretation ~$1050 .. so precise!

February 21 from Twitter - Comment - Like - Share

~50 known actionable genes are usually not covered in short read sequencing in enough depth to report back to clinicians. #AGBT13

February 21 from Twitter - Comment - Like - Share

RT @kennamshaw: LW: in 2012 pipeline takes about 2 weeks; goal by end of 2013 is 2 days- time savings being gained at every step #AGBT13

February 21 from Twitter - Comment - Like - Share

Occasionally you have to sit back and marvel that our bodies work at all, given a 1 codon change can be so debilitating to life. #AGBT13

February 21 from Twitter - Comment - Like - Share

Did anyone hear how long their clinical exome sequencing takes from biopsy to clinical report? Eng @ #agbt13

February 21 from Twitter - Comment - Like - Share