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Anyone attending the RECOMB Satellite meeting (http://compbio.mit.edu/recombs...) next week?
Yay. RECOMB wants to follow the ISMB/ISCB model from this year. Guess I'll need help. - Oliver Hofmann
Kickstarter >> The Vanderbilt Republic Foundation: “Masters” by George Del Barrio - http://www.kickstarter.com/project...
The Swell Season: Tiny Desk Concert : NPR - http://www.npr.org/templat...
The Swell Season: Tiny Desk Concert : NPR - http://www.npr.org/templat...
The Swell Season: Tiny Desk Concert : NPR - http://www.npr.org/templat...
Kickstarter >> “Masters” by George Del Barrio - http://www.kickstarter.com/project...
Kickstarter >> “Masters” by George Del Barrio - http://www.kickstarter.com/project...
Kickstarter >> “Masters” by George Del Barrio - http://www.kickstarter.com/project...
A controversial data set stirs up even more controversy - Journal of Proteome Research (ACS Publications) - http://pubs.acs.org/action...
"The data users, who are bioinformaticians, are the primary advocates for public data, “because without data release, they’ve got nothing to do,”" - Oliver Hofmann from Bookmarklet
So many issues crammed into one story! Going to take some time to make sense of all that. - Neil Saunders
anyone else have trouble with the link? removing cookie=1 fixed it http://pubs.acs.org/action... - Mike Chelen
Link was OK for me, but those cookie URL params can cause problems. - Neil Saunders
And I refuse to fix them. Can someone summarize the article, or point to an abstract somewhere else? - Deepak Singh
More of a "news and views", so no abstract. It covers a lot of ground. In a nutshell - a research group reported mass spec identification of peptides from a T. rex fossil. Other groups were sceptical and wanted to see the raw data. With some cajoling, the data were deposited in the PRIDE database - but with caveats as to the usage (they claim ownership of the peptides). Cue a long debate about data deposition, licenses, restrictions, potential for scooping etc. etc. - Neil Saunders
Summary and comment thread here too: http://cenblog.org/2008... - Neil Saunders
Thanks. and consistent with my view of the proteomics community. I still find it completely astonishing, especially given how different the genomics community is, at least when it comes to sequence data. Is the argument one based on trying to get IP, or purely publishing? - Deepak Singh
Seems like mostly a push for IP in this case. - Neil Saunders
for T Rex? *shakes head* - Deepak Singh from IM
:-) bizarre, indeed - Neil Saunders
now I remember this. Salzberg and Pevzner cracked me up. Knowing Pavel, I can even picture him saying what he writes - Deepak Singh from IM
I'd send you a PDF, only there isn't one and all attempts to generate one are thwarted by ACS's bizarre URLs and broken HTML :-) - Neil Saunders
I think my wife has the paper cause I remember talking to her about it a long time ago - Deepak Singh from IM
The Vanderbilt Republic Foundation | Welcome - http://vanderbiltrepublic.org/
The Vanderbilt Republic Foundation | Welcome - http://vanderbiltrepublic.org/
The Vanderbilt Republic Foundation | Welcome - http://vanderbiltrepublic.org/
shakes me makes me lighter - http://www.flickr.com/photos...
shakes me makes me lighter
Information Leakage from Keypads - http://www.schneier.com/blog...
I'm returning to Brookline today. - http://www.dopplr.com/travell...
See more in my Dopplr profile. - Oliver Hofmann
ISMB/ECCB 2009 Workshop: Bioinformatic Cores - http://www.fiamh.info/article...
Short-seq SIG: Metagenomics, assemblies and statistics - http://www.fiamh.info/article...
Short-seq SIG: RNA sequencing - http://www.fiamh.info/article...
Short-seq SIG: Variation discovery - http://www.fiamh.info/article...
Short-seq SIG: SNP Discovery and Cancer Genomics - http://www.fiamh.info/article...
DAM Session 3: Joint session with BOSC, afternoon of June 27th - http://www.fiamh.info/article...
DAM Session 2: Afternoon of June 27th - http://www.fiamh.info/article...
DAM Session 1: Morning of June 27th - http://www.fiamh.info/article...
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