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Vizbi2010:
Venkata P. Satagopam
Geoff Barton (http://vizbi.org/2010...) Visualization of Sequence Alignments
March 5, 2010
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Oliver Hofmann, Andrea and Jim Procter liked this
combined multiple seq alignments citations 60,000, blast 52,000
- Venkata P. Satagopam
1984 multiple sequence alignment stared with writing the sequences on paper
- Venkata P. Satagopam
1991 jalview project stared ...widely used java applet, current version 2.4 coming with lot of functionality
- Venkata P. Satagopam
challenges today ... larger protein families has > 100, 000 sequences
- Venkata P. Satagopam
whole genome alignments
- Venkata P. Satagopam
jalview used to visualized NGS data
- Venkata P. Satagopam
future : printing on very big sheets of paper?; need new viz hardware; fast high resolution screens
- Venkata P. Satagopam