Pierre Lindenbaum - FriendFeed

VIZBAM and NGSProject - http://plindenbaum.blogspot.com/2013...

May 15 from YOKOFAKUN - Comment - Like - Share

Inserting the result of a BLAST into a Database using XSLT. - http://plindenbaum.blogspot.com/2013...

May 1 from YOKOFAKUN - Comment - Like - Share

Java JNI bindings for BWA(mem-lite) - http://plindenbaum.blogspot.com/2013...

April 26 from YOKOFAKUN - Comment - Like - Share

playing with BWA-MEM : my notebook - http://plindenbaum.blogspot.com/2013...

April 23 from YOKOFAKUN - Comment - Like - Share

Embedding Pubmed, Graphiviz and a remote image in #LaTeX. My notebook. . - http://plindenbaum.blogspot.com/2013...

March 25 from YOKOFAKUN - Comment - Like - Share

Egon Willighagen liked this

Filtering a BAM with javascript. - http://plindenbaum.blogspot.com/2013...

March 13 from YOKOFAKUN - Comment - Like - Share

4 Tools I wrote today to annotate VCF files. - http://plindenbaum.blogspot.com/2013...

February 27 from YOKOFAKUN - Comment - Like - Share

Counting the reads in a BAM file using SGE and the Open-MPI library: my notebook. - http://plindenbaum.blogspot.com/2013...

February 11 from YOKOFAKUN - Comment - Like - Share

A tool to compare the BAMs - http://plindenbaum.blogspot.com/2013...

February 7 from YOKOFAKUN - Comment - Like - Share

Making use of Picard Metrics files using XML and XSLT. #ngs - http://plindenbaum.blogspot.com/2013...

February 5 from YOKOFAKUN - Comment - Like - Share

Samtools tview as a library to display the BAM - http://plindenbaum.blogspot.com/2013...

January 25 from YOKOFAKUN - Comment - Like - Share

Make - http://www.slideshare.net/lindenb...

January 23 from SlideShare - Comment - Like - Share

XML for bioinformatics - http://www.slideshare.net/lindenb...

January 23 from SlideShare - Comment - Like - Share

A XML schema (xsd) for GeneOntology - http://plindenbaum.blogspot.com/2013...

January 9 from YOKOFAKUN - Comment - Like - Share

RDF/Jena: a simple extension for XSLT/XALAN. Testing with NCBI-Gene - http://plindenbaum.blogspot.com/2012...

December 20 from YOKOFAKUN - Comment - Like - Share

Reading/Writing a VCF file with the GATK-API. - http://plindenbaum.blogspot.com/2012...

November 29 from YOKOFAKUN - Comment - Like - Share

visualizing the dependencies in a Makefile - http://plindenbaum.blogspot.com/2012...

November 21 from YOKOFAKUN - Comment - Like - Share

Creating a virtual RDF graph describing a set of OpenOffice spreadsheets with Apache Jena and Fuzeki - http://plindenbaum.blogspot.com/2012...

November 13 from YOKOFAKUN - Comment - Like - Share

Egon Willighagen liked this

Saving your tweets in a database using sqlite, rhino, scribe, javascript - http://plindenbaum.blogspot.com/2012...

November 2 from YOKOFAKUN - Comment - Like - Share

tumblwip: We went to Paris for a couple of days. These are some drawings of some of the buildings there. And, just a quick message to anybody who has an apartment in Paris; I hate you. - http://lindenb.tumblr.com/post...

October 21 from Tumblr - Comment - Like - Share

pulmonaire: Drawing by Gabriel Moreno - http://lindenb.tumblr.com/post...

October 20 from Tumblr - Comment - Like - Share

How Much Does a Shadow Weigh? - http://www.youtube.com/watch...

October 16 from YouTube favorites - Comment - Like - Share

Modifying the GATK so it supports a XML-based format for VCF. - http://plindenbaum.blogspot.com/2012...

October 15 from YOKOFAKUN - Comment - Like - Share

Calculating time from submission to publication / Degree of burden in submitting a paper - http://plindenbaum.blogspot.com/2012...

October 14 from YOKOFAKUN - Comment - Like - Share

Bill Hooker, Egon Willighagen and Cameron Neylon liked this

Playing with the #Ensembl REST API: filtering a VCF with javascript - http://plindenbaum.blogspot.com/2012...

September 27 from YOKOFAKUN - Comment - Like - Share

LEGO Great Ball Contraption (GBC) Layout 2012.9 - http://www.youtube.com/watch...

September 21 from YouTube favorites - Comment - Like - Share

Describing protein-protein interactions in XML: customizing the xsd-schema with JAXB, my notebook. - http://plindenbaum.blogspot.com/2012...

September 18 from YOKOFAKUN - Comment - Like - Share

Notes about bwa 0.6.2 and the multiples hits. - http://plindenbaum.blogspot.com/2012...

September 18 from YOKOFAKUN - Comment - Like - Share

Translating a DNA sequence into a Google Spreadsheet using #GoogleAppScript - http://plindenbaum.blogspot.com/2012...

September 13 from YOKOFAKUN - Comment - Like - Share

Troy Library - http://vimeo.com/47890552

September 12 from Vimeo favorites - Comment - Like - Share